{"id":4457,"date":"2017-02-13T16:31:07","date_gmt":"2017-02-13T16:31:07","guid":{"rendered":"https:\/\/courses.lumenlearning.com\/wm-biology1\/?page_id=4457"},"modified":"2017-02-13T21:12:50","modified_gmt":"2017-02-13T21:12:50","slug":"dna-rna-proteins","status":"publish","type":"page","link":"https:\/\/courses.lumenlearning.com\/ivytech-wmopen-nmbiology\/dna-rna-proteins\/","title":{"rendered":"DNA \u2192 RNA \u2192 Proteins"},"content":{"rendered":"<p>The central dogma of life can be defined in a fairly simple way: DNA makes\u00a0RNA, which in turn makes proteins:<\/p>\n<p><img loading=\"lazy\" decoding=\"async\" class=\"aligncenter size-full wp-image-4281\" src=\"https:\/\/s3-us-west-2.amazonaws.com\/courses-images\/wp-content\/uploads\/sites\/1087\/2017\/01\/27170812\/CentralDogma.jpg\" alt=\"DNA creates RNA through a process called transcription. RNA creates proteins through a process called translation.\" width=\"978\" height=\"252\" \/><\/p>\n<p>In transcription, your genetic code is transcribed, or written, into RNA. In translation, this RNA is then translated into proteins. Of course, the processes of transcription and translation are a little more complicated than that.\u00a0Let&#8217;s review the two processes:<\/p>\n<h2>Transcription: DNA \u2192 RNA<\/h2>\n<p>Transcription is the first half of the Central Dogma. This is where DNA is translated into RNA. Transcription occurs in the nucleus of the cell\u2014DNA cannot leave the nucleus. There are three steps in transcription: initiation, elongation, and termination (these are also the same steps as in translation; however, different things happen in the steps of the different processes).<\/p>\n<ol>\n<li><strong>Initiation:<\/strong>\u00a0Transcription begins at a\u00a0promoter: a specific region of a gene. RNA polymerase binds to the promoter. This signals the DNA to unwind. The enzyme is now ready to make mRNA<\/li>\n<li><strong>Elongation: <\/strong>Nucleotides are added to the mRNA strand\n<ul>\n<li>Remember: thymine only occurs in DNA, and uracil only occurs in RNA!<\/li>\n<\/ul>\n<\/li>\n<li><strong>Termination:\u00a0<\/strong>Transcription ends when RNA polymerase encounters a stop (termination) sequence in the gene.<\/li>\n<\/ol>\n<h3>RNA Polymerase<\/h3>\n<p>There are three types of eukaryotic RNA Polymerase. Fittingly, they&#8217;re named\u00a0RNA Polymerase I,\u00a0RNA Polymerase II, and\u00a0RNA Polymerase III.<\/p>\n<ul>\n<li><b>RNA polymerase I<\/b> is located in the nucleolus, and facilitates the\u00a0transcription of ribosomal RNA (rRNA), which is then processed and assembled into ribosomes.<\/li>\n<li><b>RNA polymerase II<\/b> is located in the nucleus and synthesizes all protein-coding nuclear pre-mRNAs.<\/li>\n<li><b>RNA polymerase III<\/b> is also located in the nucleus. This polymerase transcribes a variety of structural RNAs that includes the 5S pre-rRNA, transfer pre-RNAs (pre-tRNAs), and small nuclear pre-RNAs.<\/li>\n<\/ul>\n<h3>mRNA Processing<\/h3>\n<p>After transcription, eukaryotic pre-mRNAs must undergo several processing steps before they can be translated.<\/p>\n<p>Pre-mRNAs are first coated in RNA-stabilizing proteins; these protect the pre-mRNA from degradation while it is processed and exported out of the nucleus. The three most important steps of pre-mRNA processing are the addition of stabilizing and signaling factors at the 5\u2032 and 3\u2032 ends of the molecule, and the removal of intervening sequences that do not specify the appropriate amino acids. In rare cases, the mRNA transcript can be \u201cedited\u201d after it is transcribed.<\/p>\n<div class=\"textbox exercises\">\n<h3>PRactice Questions<\/h3>\n<p>In which step of transcription does\u00a0the DNA unwind?<\/p>\n<p><textarea aria-label=\"Your Answer\" rows=\"2\"><\/textarea><\/p>\n<div class=\"qa-wrapper\" style=\"display: block\"><span class=\"show-answer collapsed\" style=\"cursor: pointer\" data-target=\"q278713\">Show Answer<\/span><\/p>\n<div id=\"q278713\" class=\"hidden-answer\" style=\"display: none\">While this may sound like something that occurs during elongation, this is part of what happens during <strong>initiation<\/strong>. During initiation, an RNA polymerase binds to the promoter. This signals the DNA to unwind. The enzyme is now ready to make mRNA.<\/p>\n<\/div>\n<\/div>\n<p>Which is a function of RNA polymerase II?<\/p>\n<ol style=\"list-style-type: lower-alpha;\">\n<li>transcribes\u00a0transfer pre-RNAs (pre-tRNAs)<\/li>\n<li>facilitates the transcription of ribosomal RNA (rRNA)<\/li>\n<li>synthesizes all protein-coding nuclear pre-mRNAs<\/li>\n<\/ol>\n<div class=\"qa-wrapper\" style=\"display: block\"><span class=\"show-answer collapsed\" style=\"cursor: pointer\" data-target=\"q334992\">Show Answer<\/span><\/p>\n<div id=\"q334992\" class=\"hidden-answer\" style=\"display: none\">Answer b. RNA polymerase II\u00a0is located in the nucleus and synthesizes all protein-coding nuclear pre-mRNAs.<\/div>\n<\/div>\n<\/div>\n<h2>Translation: RNA \u2192 protein<\/h2>\n<p>Translation occurs\u00a0in the cytoplasm. There are three steps in translation: initiation, elongation, and termination (these are also the same steps as in transcription; however, different things happen in the steps of the different processes).<\/p>\n<ol>\n<li><b>Initiation:<\/b>\u00a0Protein synthesis begins with the formation of an initiation complex.\u00a0Translation begins with a methionine at each polypeptide chain<\/li>\n<li><b>Elongation:<\/b> The A site binds incoming charged aminoacyl tRNAs. The P site binds charged tRNAs carrying amino acids.\u00a0Elongation proceeds with charged tRNAs entering the A site and then shifting to the P site followed by the E site with each single-codon \u201cstep\u201d of the ribosome.<\/li>\n<li><b>Termination:<\/b>\u00a0A nonsense codon (UAA, UAG, or UGA) is encountered. Upon aligning with the A site, these nonsense codons are recognized by release factors<\/li>\n<\/ol>\n<h3>Ribosomes and tRNAs<\/h3>\n<div>In addition to the mRNA template, many molecules and macromolecules contribute to the process of translation.<\/div>\n<div>\n<ul>\n<li>Ribosomes bind to mRNA template<\/li>\n<li>tRNAs bind to sequences on the mRNA template and add the corresponding amino acid to the polypeptide chain<\/li>\n<\/ul>\n<\/div>\n<h3>Codons<\/h3>\n<p>The amino acids that make up proteins are encoded by a nucleotide triplet codon: for example, the protein serine is encoded by the codons UCU, UCC, UCA, and UCG.<\/p>\n<div>\n<p>The reading frame for translation is set by the AUG start codon near the 5\u2032 end of the mRNA.<\/p>\n<div>\u00a0The three &#8220;nonsense codons,&#8221; UAA, UAG, and UGA indicate that translation should be terminated.<\/div>\n<div>\n<div class=\"textbox exercises\">\n<h3>Practice Questions<\/h3>\n<p>Which macromolecule binds to the mRNA template to aid in translation?<\/p>\n<ol style=\"list-style-type: lower-alpha;\">\n<li>tRNA<\/li>\n<li>A sites<\/li>\n<li>ribosomes<\/li>\n<\/ol>\n<div class=\"qa-wrapper\" style=\"display: block\"><span class=\"show-answer collapsed\" style=\"cursor: pointer\" data-target=\"q577852\">Show Answer<\/span><\/p>\n<div id=\"q577852\" class=\"hidden-answer\" style=\"display: none\">Answer c.\u00a0Ribosomes bind to mRNA template.tRNAs bind to sequences on the mRNA template and add the corresponding amino acid to the polypeptide chain.A sites bind with incoming tRNAs.<\/p>\n<\/div>\n<\/div>\n<p>What do\u00a0nucleotide triplet codons encode?<\/p>\n<p><textarea aria-label=\"Your Answer\" rows=\"2\"><\/textarea><\/p>\n<div class=\"qa-wrapper\" style=\"display: block\"><span class=\"show-answer collapsed\" style=\"cursor: pointer\" data-target=\"q690696\">Show Answer<\/span><\/p>\n<div id=\"q690696\" class=\"hidden-answer\" style=\"display: none\">Nucleotide triplet codons, such as UCU or GGA, encode the amino acids that make up proteins.<\/div>\n<\/div>\n<\/div>\n<p>&nbsp;<\/p>\n<\/div>\n<\/div>\n","protected":false},"excerpt":{"rendered":"<p>The central dogma of life can be defined in a fairly simple way: DNA makes\u00a0RNA, which in turn makes proteins: In transcription, your genetic code is transcribed, or written, into RNA. In translation, this RNA is then translated into proteins. Of course, the processes of transcription and translation are a little more complicated than that.\u00a0Let&#8217;s<a class=\"more-tag\" href=\"https:\/\/courses.lumenlearning.com\/ivytech-wmopen-nmbiology\/dna-rna-proteins\/\"> Read more &raquo;<\/a><\/p>\n","protected":false},"author":17,"featured_media":0,"parent":0,"menu_order":2,"comment_status":"closed","ping_status":"closed","template":"","meta":{"footnotes":""},"class_list":["post-4457","page","type-page","status-publish","hentry"],"_links":{"self":[{"href":"https:\/\/courses.lumenlearning.com\/ivytech-wmopen-nmbiology\/wp-json\/wp\/v2\/pages\/4457","targetHints":{"allow":["GET"]}}],"collection":[{"href":"https:\/\/courses.lumenlearning.com\/ivytech-wmopen-nmbiology\/wp-json\/wp\/v2\/pages"}],"about":[{"href":"https:\/\/courses.lumenlearning.com\/ivytech-wmopen-nmbiology\/wp-json\/wp\/v2\/types\/page"}],"author":[{"embeddable":true,"href":"https:\/\/courses.lumenlearning.com\/ivytech-wmopen-nmbiology\/wp-json\/wp\/v2\/users\/17"}],"replies":[{"embeddable":true,"href":"https:\/\/courses.lumenlearning.com\/ivytech-wmopen-nmbiology\/wp-json\/wp\/v2\/comments?post=4457"}],"version-history":[{"count":5,"href":"https:\/\/courses.lumenlearning.com\/ivytech-wmopen-nmbiology\/wp-json\/wp\/v2\/pages\/4457\/revisions"}],"predecessor-version":[{"id":4471,"href":"https:\/\/courses.lumenlearning.com\/ivytech-wmopen-nmbiology\/wp-json\/wp\/v2\/pages\/4457\/revisions\/4471"}],"wp:attachment":[{"href":"https:\/\/courses.lumenlearning.com\/ivytech-wmopen-nmbiology\/wp-json\/wp\/v2\/media?parent=4457"}],"curies":[{"name":"wp","href":"https:\/\/api.w.org\/{rel}","templated":true}]}}