{"id":1090,"date":"2017-05-11T17:20:28","date_gmt":"2017-05-11T17:20:28","guid":{"rendered":"https:\/\/courses.lumenlearning.com\/suny-natural-resources-biometrics\/back-matter\/lab-5\/"},"modified":"2017-05-11T17:20:28","modified_gmt":"2017-05-11T17:20:28","slug":"lab-5","status":"publish","type":"back-matter","link":"https:\/\/courses.lumenlearning.com\/suny-natural-resources-biometrics\/back-matter\/lab-5\/","title":{"raw":"Lab 5","rendered":"Lab 5"},"content":{"raw":"<div class=\"textbox shaded\" style=\"text-align: center\"><a href=\"http:\/\/textbooks.opensuny.org\/download\/natural-resources-biometrics-lab-5\/\">Download a printer-friendly version of this lab here.<\/a><\/div>\n<p class=\"Chapter-Title\">Name:\u00a0<span>__________________<\/span><span>__________________<\/span><span>__________________<\/span><\/p>\nYou are working on an alternative energy source and biomass is a key component. You want to predict above-ground biomass for this region, and you believe that biomass is related to substrate (subsoil) variables of salinity, water acidity, potassium, sodium, and zinc. Your crew collects information on biomass and these five variables for 45 plots.\n\n1) Before you create this regression model, you must examine the relationships between each of the five predictor variables and biomass (the response variable). Create five scatterplots using biomass as the response variable (y) and each of the predictor variables (x). Compute the linear correlation coefficient for each pair. Describe the relationships.\n\n<strong class=\"Strong-2\">GRAPH&gt;Scatterplot&gt;Simple&gt;OK<\/strong>. The response variable (y-variable) is Bio and the five predictor variables are the x-variables. Look at the scatterplots and describe each relationship below. Next compute the correlation coefficient for each pair and write the r-value below. <strong class=\"Strong-2\">STAT&gt;Basic Statistics&gt;Correlation<\/strong>. You can easily do all correlations at once by creating a correlation matrix. Put all predictor variables in the <strong class=\"Strong-2\">Variables<\/strong> box together.\n<p class=\"No-Caption\"><em><span class=\"Picture\"><img alt=\"Image39257.PNG\" class=\"frame-13 aligncenter\" src=\"https:\/\/s3-us-west-2.amazonaws.com\/courses-images\/wp-content\/uploads\/sites\/1888\/2017\/05\/11172013\/Image39257_fmt.png\" \/><\/span><\/em><\/p>\n<p class=\"No-Caption\"><span class=\"Picture\"><img alt=\"Image39265.PNG\" class=\"frame-111 aligncenter\" src=\"https:\/\/s3-us-west-2.amazonaws.com\/courses-images\/wp-content\/uploads\/sites\/1888\/2017\/05\/11172017\/Image39265_fmt.png\" \/><\/span><\/p>\n<p class=\"Side-by-Side-Equations\" style=\"text-align: center\">Correlation (r) \u00a0 \u00a0 \u00a0 \u00a0 \u00a0 \u00a0 \u00a0 \u00a0 \u00a0 \u00a0 \u00a0 \u00a0 \u00a0 Description<\/p>\n<p class=\"Form\">Bio v. sal\u00a0<span>__________________<\/span><span>__________________<\/span><span>__________________<\/span><\/p>\n<p class=\"Form\">Bio v.pH\u00a0<span>__________________<\/span><span>__________________<\/span><span>__________________<\/span><\/p>\n<p class=\"Form\">Bio v. K\u00a0<span>__________________<\/span><span>__________________<\/span><span>___________________<\/span><\/p>\n<p class=\"Form\">Bio v. Na\u00a0<span>__________________<\/span><span>__________________<\/span><span>__________________<\/span><\/p>\n<p class=\"Form\">Bio v. Zn\u00a0<span>__________________<\/span><span>__________________<\/span><span>__________________<\/span><\/p>\nCircle the above pair that has the strongest linear relationship.\n\n2) You are now going to create four regression models using the predictor variables. You will compare the adjusted R<span class=\"Superscript SmallText\">2<\/span>, regression standard error, p-values for each coefficient, and the residuals for each model. Using this information, you will select the best model and state your reasons for this choice.\n\nBegin with the full model using all five predictor variables. <strong class=\"Strong-2\">STAT&gt;Regression&gt;General Regression<\/strong>. Put Bio in the <strong class=\"Strong-2\">Response<\/strong> box and all five predictor variables in the <strong class=\"Strong-2\">Model<\/strong> box (see image). Click <strong class=\"Strong-2\">Results<\/strong> and make sure that the Regression equation, coefficient table, Display confidence intervals, Summary of Model, and Analysis of Variance Table are checked (see image). Click OK. Click <strong class=\"Strong-2\">Graphs<\/strong> and make sure that under <strong class=\"Strong-2\">Residual Plots<\/strong> that Individual plots and Residual versus Fits are selected (see image). Click OK.\n<p class=\"No-Caption\"><em><span class=\"Picture\"><img alt=\"Image39273.PNG\" class=\"frame-13 aligncenter\" src=\"https:\/\/s3-us-west-2.amazonaws.com\/courses-images\/wp-content\/uploads\/sites\/1888\/2017\/05\/11172020\/Image39273_fmt.png\" \/><\/span>\u00a0<\/em><\/p>\n\n<h4><span class=\"Picture\"><img alt=\"Image39285.PNG\" class=\"frame-13 aligncenter\" src=\"https:\/\/s3-us-west-2.amazonaws.com\/courses-images\/wp-content\/uploads\/sites\/1888\/2017\/05\/11172024\/Image39285_fmt.png\" \/><\/span><\/h4>\n<h4>MODEL 1<\/h4>\n<p class=\"Form\">Write the regression model\u00a0<span>__________________<\/span><span>__________________<\/span><span>___________<\/span><\/p>\n<p class=\"Form\">Write the adj. R<span class=\"Superscript SmallText\">2\u00a0<span>__________________<\/span><span>__________________<\/span><span>____________________<\/span><\/span><\/p>\n<p class=\"Form\">Write the regression standard error\u00a0<span>__________________<\/span><span>_______________________<\/span><\/p>\n<p class=\"Form\">Examine the residual plot. Are there any problems?\u00a0<span>__________________<\/span><span>__________<\/span><\/p>\n<p class=\"Form\">Write the variables which are NOT significant\u00a0<span>__________________<\/span><span>______________<\/span><\/p>\n\n<h4>MODEL 2<\/h4>\nNow remove the LEAST significant variable (highest p-value) and repeat the steps using only the remaining variables.\n<p class=\"Form\">Write the regression model\u00a0<span>__________________<\/span><span>__________________<\/span><span>___________<\/span><\/p>\n<p class=\"Form\">Write the adj. R<span class=\"Superscript SmallText\">2\u00a0<span>__________________<\/span><span>__________________<\/span><span>____________________<\/span><\/span><\/p>\n<p class=\"Form\">Write the regression standard error\u00a0<span>__________________<\/span><span>_______________________<\/span><\/p>\n<p class=\"Form\">Examine the residual plot. Are there any problems?\u00a0<span>__________________<\/span><span>__________<\/span><\/p>\n<p class=\"Form\">Write the variables which are NOT significant\u00a0<span>__________________<\/span><span>______________<\/span><\/p>\n<p class=\"Form\">MODEL 3<\/p>\nNow remove the LEAST significant variable (highest p-value) and repeat the steps using only the remaining variables.\n<p class=\"Form\">Write the regression model\u00a0<span>__________________<\/span><span>__________________<\/span><span>___________<\/span><\/p>\n<p class=\"Form\">Write the adj. R<span class=\"Superscript SmallText\">2\u00a0<span>__________________<\/span><span>__________________<\/span><span>____________________<\/span><\/span><\/p>\n<p class=\"Form\">Write the regression standard error\u00a0<span>__________________<\/span><span>_______________________<\/span><\/p>\n<p class=\"Form\">Examine the residual plot. Are there any problems?\u00a0<span>__________________<\/span><span>__________<\/span><\/p>\n<p class=\"Form\">Write the variables which are NOT significant\u00a0<span>__________________<\/span><span>______________<\/span><\/p>\n\n<h4>MODEL 4<\/h4>\nNow remove the LEAST significant variable (highest p-value) and repeat the steps using only the remaining variables.\n<p class=\"Form\">Write the regression model\u00a0<span>__________________<\/span><span>__________________<\/span><span>___________<\/span><\/p>\n<p class=\"Form\">Write the adj. R<span class=\"Superscript SmallText\">2\u00a0<span>__________________<\/span><span>__________________<\/span><span>____________________<\/span><\/span><\/p>\n<p class=\"Form\">Write the regression standard error\u00a0<span>__________________<\/span><span>_______________________<\/span><\/p>\n<p class=\"Form\">Examine the residual plot. Are there any problems?\u00a0<span>__________________<\/span><span>__________<\/span><\/p>\n<p class=\"Form\">Write the variables which are NOT significant\u00a0<span>__________________<\/span><span>______________<\/span><\/p>\n3) Select the best model and state your reasons for selecting this model.\n<p class=\"No-Caption\"><span class=\"Picture\"><img alt=\"Lab%205.tif\" class=\"frame-4 aligncenter\" src=\"https:\/\/s3-us-west-2.amazonaws.com\/courses-images\/wp-content\/uploads\/sites\/1888\/2017\/05\/11172027\/Lab-5_fmt.png\" \/><\/span><\/p>","rendered":"<div class=\"textbox shaded\" style=\"text-align: center\"><a href=\"http:\/\/textbooks.opensuny.org\/download\/natural-resources-biometrics-lab-5\/\">Download a printer-friendly version of this lab here.<\/a><\/div>\n<p class=\"Chapter-Title\">Name:\u00a0<span>__________________<\/span><span>__________________<\/span><span>__________________<\/span><\/p>\n<p>You are working on an alternative energy source and biomass is a key component. You want to predict above-ground biomass for this region, and you believe that biomass is related to substrate (subsoil) variables of salinity, water acidity, potassium, sodium, and zinc. Your crew collects information on biomass and these five variables for 45 plots.<\/p>\n<p>1) Before you create this regression model, you must examine the relationships between each of the five predictor variables and biomass (the response variable). Create five scatterplots using biomass as the response variable (y) and each of the predictor variables (x). Compute the linear correlation coefficient for each pair. Describe the relationships.<\/p>\n<p><strong class=\"Strong-2\">GRAPH&gt;Scatterplot&gt;Simple&gt;OK<\/strong>. The response variable (y-variable) is Bio and the five predictor variables are the x-variables. Look at the scatterplots and describe each relationship below. Next compute the correlation coefficient for each pair and write the r-value below. <strong class=\"Strong-2\">STAT&gt;Basic Statistics&gt;Correlation<\/strong>. You can easily do all correlations at once by creating a correlation matrix. Put all predictor variables in the <strong class=\"Strong-2\">Variables<\/strong> box together.<\/p>\n<p class=\"No-Caption\"><em><span class=\"Picture\"><img decoding=\"async\" alt=\"Image39257.PNG\" class=\"frame-13 aligncenter\" src=\"https:\/\/s3-us-west-2.amazonaws.com\/courses-images\/wp-content\/uploads\/sites\/1888\/2017\/05\/11172013\/Image39257_fmt.png\" \/><\/span><\/em><\/p>\n<p class=\"No-Caption\"><span class=\"Picture\"><img decoding=\"async\" alt=\"Image39265.PNG\" class=\"frame-111 aligncenter\" src=\"https:\/\/s3-us-west-2.amazonaws.com\/courses-images\/wp-content\/uploads\/sites\/1888\/2017\/05\/11172017\/Image39265_fmt.png\" \/><\/span><\/p>\n<p class=\"Side-by-Side-Equations\" style=\"text-align: center\">Correlation (r) \u00a0 \u00a0 \u00a0 \u00a0 \u00a0 \u00a0 \u00a0 \u00a0 \u00a0 \u00a0 \u00a0 \u00a0 \u00a0 Description<\/p>\n<p class=\"Form\">Bio v. sal\u00a0<span>__________________<\/span><span>__________________<\/span><span>__________________<\/span><\/p>\n<p class=\"Form\">Bio v.pH\u00a0<span>__________________<\/span><span>__________________<\/span><span>__________________<\/span><\/p>\n<p class=\"Form\">Bio v. K\u00a0<span>__________________<\/span><span>__________________<\/span><span>___________________<\/span><\/p>\n<p class=\"Form\">Bio v. Na\u00a0<span>__________________<\/span><span>__________________<\/span><span>__________________<\/span><\/p>\n<p class=\"Form\">Bio v. Zn\u00a0<span>__________________<\/span><span>__________________<\/span><span>__________________<\/span><\/p>\n<p>Circle the above pair that has the strongest linear relationship.<\/p>\n<p>2) You are now going to create four regression models using the predictor variables. You will compare the adjusted R<span class=\"Superscript SmallText\">2<\/span>, regression standard error, p-values for each coefficient, and the residuals for each model. Using this information, you will select the best model and state your reasons for this choice.<\/p>\n<p>Begin with the full model using all five predictor variables. <strong class=\"Strong-2\">STAT&gt;Regression&gt;General Regression<\/strong>. Put Bio in the <strong class=\"Strong-2\">Response<\/strong> box and all five predictor variables in the <strong class=\"Strong-2\">Model<\/strong> box (see image). Click <strong class=\"Strong-2\">Results<\/strong> and make sure that the Regression equation, coefficient table, Display confidence intervals, Summary of Model, and Analysis of Variance Table are checked (see image). Click OK. Click <strong class=\"Strong-2\">Graphs<\/strong> and make sure that under <strong class=\"Strong-2\">Residual Plots<\/strong> that Individual plots and Residual versus Fits are selected (see image). Click OK.<\/p>\n<p class=\"No-Caption\"><em><span class=\"Picture\"><img decoding=\"async\" alt=\"Image39273.PNG\" class=\"frame-13 aligncenter\" src=\"https:\/\/s3-us-west-2.amazonaws.com\/courses-images\/wp-content\/uploads\/sites\/1888\/2017\/05\/11172020\/Image39273_fmt.png\" \/><\/span>\u00a0<\/em><\/p>\n<h4><span class=\"Picture\"><img decoding=\"async\" alt=\"Image39285.PNG\" class=\"frame-13 aligncenter\" src=\"https:\/\/s3-us-west-2.amazonaws.com\/courses-images\/wp-content\/uploads\/sites\/1888\/2017\/05\/11172024\/Image39285_fmt.png\" \/><\/span><\/h4>\n<h4>MODEL 1<\/h4>\n<p class=\"Form\">Write the regression model\u00a0<span>__________________<\/span><span>__________________<\/span><span>___________<\/span><\/p>\n<p class=\"Form\">Write the adj. R<span class=\"Superscript SmallText\">2\u00a0<span>__________________<\/span><span>__________________<\/span><span>____________________<\/span><\/span><\/p>\n<p class=\"Form\">Write the regression standard error\u00a0<span>__________________<\/span><span>_______________________<\/span><\/p>\n<p class=\"Form\">Examine the residual plot. Are there any problems?\u00a0<span>__________________<\/span><span>__________<\/span><\/p>\n<p class=\"Form\">Write the variables which are NOT significant\u00a0<span>__________________<\/span><span>______________<\/span><\/p>\n<h4>MODEL 2<\/h4>\n<p>Now remove the LEAST significant variable (highest p-value) and repeat the steps using only the remaining variables.<\/p>\n<p class=\"Form\">Write the regression model\u00a0<span>__________________<\/span><span>__________________<\/span><span>___________<\/span><\/p>\n<p class=\"Form\">Write the adj. R<span class=\"Superscript SmallText\">2\u00a0<span>__________________<\/span><span>__________________<\/span><span>____________________<\/span><\/span><\/p>\n<p class=\"Form\">Write the regression standard error\u00a0<span>__________________<\/span><span>_______________________<\/span><\/p>\n<p class=\"Form\">Examine the residual plot. Are there any problems?\u00a0<span>__________________<\/span><span>__________<\/span><\/p>\n<p class=\"Form\">Write the variables which are NOT significant\u00a0<span>__________________<\/span><span>______________<\/span><\/p>\n<p class=\"Form\">MODEL 3<\/p>\n<p>Now remove the LEAST significant variable (highest p-value) and repeat the steps using only the remaining variables.<\/p>\n<p class=\"Form\">Write the regression model\u00a0<span>__________________<\/span><span>__________________<\/span><span>___________<\/span><\/p>\n<p class=\"Form\">Write the adj. R<span class=\"Superscript SmallText\">2\u00a0<span>__________________<\/span><span>__________________<\/span><span>____________________<\/span><\/span><\/p>\n<p class=\"Form\">Write the regression standard error\u00a0<span>__________________<\/span><span>_______________________<\/span><\/p>\n<p class=\"Form\">Examine the residual plot. Are there any problems?\u00a0<span>__________________<\/span><span>__________<\/span><\/p>\n<p class=\"Form\">Write the variables which are NOT significant\u00a0<span>__________________<\/span><span>______________<\/span><\/p>\n<h4>MODEL 4<\/h4>\n<p>Now remove the LEAST significant variable (highest p-value) and repeat the steps using only the remaining variables.<\/p>\n<p class=\"Form\">Write the regression model\u00a0<span>__________________<\/span><span>__________________<\/span><span>___________<\/span><\/p>\n<p class=\"Form\">Write the adj. R<span class=\"Superscript SmallText\">2\u00a0<span>__________________<\/span><span>__________________<\/span><span>____________________<\/span><\/span><\/p>\n<p class=\"Form\">Write the regression standard error\u00a0<span>__________________<\/span><span>_______________________<\/span><\/p>\n<p class=\"Form\">Examine the residual plot. Are there any problems?\u00a0<span>__________________<\/span><span>__________<\/span><\/p>\n<p class=\"Form\">Write the variables which are NOT significant\u00a0<span>__________________<\/span><span>______________<\/span><\/p>\n<p>3) Select the best model and state your reasons for selecting this model.<\/p>\n<p class=\"No-Caption\"><span class=\"Picture\"><img decoding=\"async\" alt=\"Lab%205.tif\" class=\"frame-4 aligncenter\" src=\"https:\/\/s3-us-west-2.amazonaws.com\/courses-images\/wp-content\/uploads\/sites\/1888\/2017\/05\/11172027\/Lab-5_fmt.png\" \/><\/span><\/p>\n\n\t\t\t <section class=\"citations-section\" role=\"contentinfo\">\n\t\t\t <h3>Candela Citations<\/h3>\n\t\t\t\t\t <div>\n\t\t\t\t\t\t <div id=\"citation-list-1090\">\n\t\t\t\t\t\t\t <div class=\"licensing\"><div class=\"license-attribution-dropdown-subheading\">CC licensed content, Shared previously<\/div><ul class=\"citation-list\"><li>Natural Resources Biometrics. <strong>Authored by<\/strong>: Diane Kiernan. <strong>Located at<\/strong>: <a target=\"_blank\" href=\"https:\/\/textbooks.opensuny.org\/natural-resources-biometrics\/\">https:\/\/textbooks.opensuny.org\/natural-resources-biometrics\/<\/a>. <strong>Project<\/strong>: Open SUNY Textbooks. <strong>License<\/strong>: <em><a target=\"_blank\" rel=\"license\" href=\"https:\/\/creativecommons.org\/licenses\/by-nc-sa\/4.0\/\">CC BY-NC-SA: Attribution-NonCommercial-ShareAlike<\/a><\/em><\/li><\/ul><\/div>\n\t\t\t\t\t\t <\/div>\n\t\t\t\t\t <\/div>\n\t\t\t <\/section>","protected":false},"author":622,"menu_order":5,"template":"","meta":{"_candela_citation":"[{\"type\":\"cc\",\"description\":\"Natural Resources Biometrics\",\"author\":\"Diane Kiernan\",\"organization\":\"\",\"url\":\"https:\/\/textbooks.opensuny.org\/natural-resources-biometrics\/\",\"project\":\"Open SUNY Textbooks\",\"license\":\"cc-by-nc-sa\",\"license_terms\":\"\"}]","CANDELA_OUTCOMES_GUID":"","pb_show_title":"on","pb_short_title":"","pb_subtitle":"","pb_authors":[],"pb_section_license":""},"back-matter-type":[27],"contributor":[],"license":[],"class_list":["post-1090","back-matter","type-back-matter","status-publish","hentry","back-matter-type-appendix"],"_links":{"self":[{"href":"https:\/\/courses.lumenlearning.com\/suny-natural-resources-biometrics\/wp-json\/pressbooks\/v2\/back-matter\/1090","targetHints":{"allow":["GET"]}}],"collection":[{"href":"https:\/\/courses.lumenlearning.com\/suny-natural-resources-biometrics\/wp-json\/pressbooks\/v2\/back-matter"}],"about":[{"href":"https:\/\/courses.lumenlearning.com\/suny-natural-resources-biometrics\/wp-json\/wp\/v2\/types\/back-matter"}],"author":[{"embeddable":true,"href":"https:\/\/courses.lumenlearning.com\/suny-natural-resources-biometrics\/wp-json\/wp\/v2\/users\/622"}],"version-history":[{"count":0,"href":"https:\/\/courses.lumenlearning.com\/suny-natural-resources-biometrics\/wp-json\/pressbooks\/v2\/back-matter\/1090\/revisions"}],"metadata":[{"href":"https:\/\/courses.lumenlearning.com\/suny-natural-resources-biometrics\/wp-json\/pressbooks\/v2\/back-matter\/1090\/metadata\/"}],"wp:attachment":[{"href":"https:\/\/courses.lumenlearning.com\/suny-natural-resources-biometrics\/wp-json\/wp\/v2\/media?parent=1090"}],"wp:term":[{"taxonomy":"back-matter-type","embeddable":true,"href":"https:\/\/courses.lumenlearning.com\/suny-natural-resources-biometrics\/wp-json\/pressbooks\/v2\/back-matter-type?post=1090"},{"taxonomy":"contributor","embeddable":true,"href":"https:\/\/courses.lumenlearning.com\/suny-natural-resources-biometrics\/wp-json\/wp\/v2\/contributor?post=1090"},{"taxonomy":"license","embeddable":true,"href":"https:\/\/courses.lumenlearning.com\/suny-natural-resources-biometrics\/wp-json\/wp\/v2\/license?post=1090"}],"curies":[{"name":"wp","href":"https:\/\/api.w.org\/{rel}","templated":true}]}}